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filename: s3pt1_coralcondition_diseaseprevalence_33sites_2002_2023.csv
date: 2026-07-06 02:09:14.285156
description: Disease condition prevalences recorded from TCRMP coral health surveys
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column names:
site year replicate date period ncolonies prev_darkspotdisease prev_yellowbanddisease prev_whiteplague prev_stonycoraltissuelossdisease prev_diseasedcoral prev_suspectedstonycoraltissuelossdisease prev_blackbanddisease prev_unknowndisease prev_acute/rapidtissueloss prev_intercostalmortalitysyndrome prev_whitebanddisease prev_anydisease prev_nodisease

column: site
description: TCRMP site
Data Type: character
Unique Values: (showing all 33 entries)
   Black Point
   Botany Bay
   Brewers Bay
   Buck Island STT
   Buck Island STX
   Buck Island STX Deep
   Cane Bay
   Cane Bay Deep
   Castle
   Coculus Rock
   College Shoal East
   Coral Bay
   Eagle Ray
   Fish Bay
   Flat Cay
   Grammanik Tiger FSA
   Great Pond
   Hind Bank East FSA
   Jacks Bay
   Kings Corner
   Lang Bank EEMP
   Lang Bank Red Hind FSA
   Magens Bay
   Meri Shoal
   Mutton Snapper FSA
   Salt River Deep
   Salt River West
   Savana
   Seahorse Cottage Shoal
   South Capella
   South Water
   Sprat Hole
   St James

column: year
description: survey year
Data Type: integer
Mean: 2013.73876404494
Min: 2002
Max: 2023

column: replicate
description: replicate / transect
Data Type: character
Unique Values: (showing all 23 entries)
   1
   2
   3
   4
   5
   6
   1L
   1R
   2L
   2R
   3L
   3R
   10
   11
   12
   13
   14
   7
   8
   9
   1A
   3A
   4A

column: date
description: Date the sample was taken
Data Type: Date
Date Range: 2002-05-23 to 2023-12-07

column: period
description: Sample period
Data Type: character
Unique Values: (showing all 5 entries)
   Annual
   PeakBL
   WS
   SCTLD
   PostBL

column: ncolonies
description: number of colonies
Data Type: integer
Mean: 18.876170411985
Min: 1
Max: 392

column: prev_darkspotdisease
description: prevalence of Dark spot disease (%)
Data Type: numeric
Mean: 1.19910523756723
Min: 0
Max: 33.3333333333333

column: prev_yellowbanddisease
description: prevalence of Yellow band disease (%)
Data Type: numeric
Mean: 0.203768908823292
Min: 0
Max: 33.3333333333333

column: prev_whiteplague
description: prevalence of White plague (%)
Data Type: numeric
Mean: 0.542611503291869
Min: 0
Max: 60

column: prev_stonycoraltissuelossdisease
description: prevalence of Stony coral tissue loss disease (%)
Data Type: numeric
Mean: 0.317395064886389
Min: 0
Max: 37.5

column: prev_diseasedcoral
description: prevalence of Diseased coral (%)
Data Type: numeric
Mean: 0.442553472273035
Min: 0
Max: 40

column: prev_suspectedstonycoraltissuelossdisease
description: prevalence of Suspected stony coral tissue loss disease (%)
Data Type: numeric
Mean: 0
Min: 0
Max: 0

column: prev_blackbanddisease
description: prevalence of Black band disease (%)
Data Type: numeric
Mean: 0.0475828817182915
Min: 0
Max: 33.3333333333333

column: prev_unknowndisease
description: prevalence of Unknown disease (%)
Data Type: numeric
Mean: 0.00605718924859982
Min: 0
Max: 14.2857142857143

column: prev_acute/rapidtissueloss
description: prevalence of Acute/rapid tissue loss (%)
Data Type: numeric
Mean: 0.011609620825716
Min: 0
Max: 21.4285714285714

column: prev_intercostalmortalitysyndrome
description: prevalence of Intercostal mortality syndrome (%)
Data Type: numeric
Mean: 0.0121934359718958
Min: 0
Max: 16.6666666666667

column: prev_whitebanddisease
description: prevalence of White band disease (%)
Data Type: numeric
Mean: 0.00260091552226396
Min: 0
Max: 11.1111111111111

column: prev_anydisease
description: prevalence of anydisease (%)
Data Type: numeric
Mean: 2.76620471169413
Min: 0
Max: 66.6666666666667

column: prev_nodisease
description: prevalence of nodisease (%)
Data Type: numeric
Mean: 97.2337952883059
Min: 33.3333333333333
Max: 100